Brix (database)
BriX is a database containing some protein fragments from 4 to 14 residue from non-homologous proteins.[1]
 | |
| Content | |
|---|---|
| Description | database of protein fragments |
| Contact | |
| Research center | University of Brussels |
| Laboratory | VIB SWITCH Laboratory |
| Primary citation | PMID 20972210 |
| Release date | 2010 |
| Access | |
| Website | http://brix.crg.es |
There are very few loops registered in Brix, so to address this issue, Loop Brix was added to the system to help structure non-regular elements. These are organized with clustering of end to end elements, and their distance between residues that flank the top of the peptide. Currently, the system also encourages user submitted structures to be uploaded, so long as they match Brix classes.[2]
See also
References
- Vanhee, Peter; Verschueren Erik; Baeten Lies; Stricher Francois; Serrano Luis; Rousseau Frederic; Schymkowitz Joost (Jan 2011). "BriX: a database of protein building blocks for structural analysis, modeling and design". Nucleic Acids Res. England. 39 (Database issue): D435-42. doi:10.1093/nar/gkq972. PMC 3013806. PMID 20972210.
- "Brix overview". Neobiolab. July 28, 2013. Retrieved 3 August 2015.
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