DOT (graph description language)

DOT is a graph description language, developed as a part of the Graphviz project. DOT graphs are typically stored as files with the .gv or .dot filename extension — .gv is preferred, to avoid confusion with the .dot extension used by versions of Microsoft Word before 2007.[1] dot is also the name of the main program to process DOT files in the Graphviz package.

DOT
Filename extensions.gv
Internet media typetext/vnd.graphviz
Type of formatGraph description language
Open format?Yes

Various programs can process DOT files. Some, such as dot, neato, twopi, circo, fdp, and sfdp, can read a DOT file and render it in graphical form. Others, such as gvpr, gc, acyclic, ccomps, sccmap, and tred, read DOT files and perform calculations on the represented graph. Finally, others, such as lefty, dotty, and grappa, provide an interactive interface. The GVedit tool combines a text editor and a non-interactive viewer. Most programs are part of the Graphviz package or use it internally.

DOT is historically an acronym for “DAG of tomorrow”, as the successor to a DAG format and a dag program which handled only directed acyclic graphs.[2]

Syntax

Undirected graphs
An undirected graph

At its simplest, DOT can be used to describe an undirected graph. An undirected graph shows simple relations between objects, such as reciprocal friendship between people. The graph keyword is used to begin a new graph, and nodes are described within curly braces. A double-hyphen (--) is used to show relations between the nodes.

// The graph name and the semicolons are optional
graph graphname {
    a -- b -- c;
    b -- d;
}

Directed graphs
A directed graph

Similar to undirected graphs, DOT can describe directed graphs, such as flowcharts and dependency trees. The syntax is the same as for undirected graphs, except the digraph keyword is used to begin the graph, and an arrow (->) is used to show relationships between nodes.

digraph graphname {
    a -> b -> c;
    b -> d;
}

Attributes
A graph with attributes

Various attributes can be applied to graphs, nodes and edges in DOT files.[3] These attributes can control aspects such as color, shape, and line styles. For nodes and edges, one or more attribute–value pairs are placed in square brackets [] after a statement and before the semicolon (which is optional). Graph attributes are specified as direct attribute–value pairs under the graph element, where multiple attributes are separated by a comma or using multiple sets of square brackets, while node attributes are placed after a statement containing only the name of the node, but not the relations between the dots.

graph graphname {
    // This attribute applies to the graph itself
    size="1,1";
    // The label attribute can be used to change the label of a node
    a [label="Foo"];
    // Here, the node shape is changed.
    b [shape=box];
    // These edges both have different line properties
    a -- b -- c [color=blue];
    b -- d [style=dotted];
    // [style=invis] hides a node.
}

HTML-like labels are supported, although initially Graphviz did not handle them.[4]

Comments

DOT supports C and C++ style single line and multiple line comments. In addition, it ignores lines with a number sign symbol # as their first character, like many interpreted languages.

// This is a single line comment.
/* This is a
   multiple line
   comment. */
# Lines like this are also ignored.

A simple example
A rendering of the example script using the tool dotty

Following is an example script that describes the bonding structure of an ethane molecule. This is an undirected graph and contains node attributes as explained above.

graph ethane {
    C_0 -- H_0 [type=s];
    C_0 -- H_1 [type=s];
    C_0 -- H_2 [type=s];
    C_0 -- C_1 [type=s];
    C_1 -- H_3 [type=s];
    C_1 -- H_4 [type=s];
    C_1 -- H_5 [type=s];
}

Layout programs
Binary tree generated in Graphviz from a DOT description by an online Huffman Tree generator

The DOT language defines a graph, but does not provide facilities for rendering the graph. There are several programs that can be used to render, view, and manipulate graphs in the DOT language:

General
  • Graphviz – a collection of CLI utilities and libraries to manipulate and render graphs into different formats like SVG, PDF, PNG etc.
    • dot – CLI tool for conversion between .dot and other formats

JavaScript
  • Canviz – a JavaScript library for rendering DOT files[5]
  • d3-graphviz – a JavaScript library based on Viz.js and D3.js that renders DOT graphs and supports animated transitions between graphs and interactive graph manipulation[6]
  • Vis.js – a JavaScript library that accept DOT as input for network graphs.[7]
  • Viz.js – a JavaScript port of Graphviz that provides a simple wrapper for using it in the browser.
  • hpcc-js/wasm Graphviz – a fast WASM library for Graphviz similar to Viz.js[8]

Java
  • Gephi – an interactive visualization and exploration platform for all kinds of networks and complex systems, dynamic and hierarchical graphs
  • Grappa – a partial port of Graphviz to Java
  • graphviz-java – an open source partial port of Graphviz to Java available from github.com
  • ZGRViewer – a DOT viewer[9]

Other

Limitations

While the DOT format allows the user to specify layout details via positional attributes, most tools rely on automated layout algorithms. These algorithms are best efforts and sometimes produce undesirable results.

For example:

Code
digraph g {
	node [shape=plaintext];
	A1 -> B1;
	A2 -> B2;
	A3 -> B3;
	
	A1 -> A2 [label=f];
	A2 -> A3 [label=g];
	B2 -> B3 [label="g'"];
	B1 -> B3 [label="(g o f)'" tailport=s headport=s];

	{ rank=same; A1 A2 A3 }
	{ rank=same; B1 B2 B3 } 
}
Natural outputEdited output
An image that seems improperly rendered.
After moving labels and arrows a bit, and changing font size of subscripts, the image looks correct.

There are presentation problems in the image titled “An image that seems improperly rendered”. The square on the right is not a perfect square, and some labels are misaligned with their arrows (such as (g o f)').

This can be fixed with a vector graphics editor. In some cases, this can also be fixed by using the pos attribute to specify a position, and the weight attribute to square the graph.

Notes
  1. "File extension .dot or .gv?". marc.info. Retrieved 2011-03-08.
  2. "'dot' name (etymology)". Graphviz. 2022-11-14. Retrieved 2023-07-10.
  3. "Node, Edge and Graph Attributes". graphviz.org. Retrieved 2017-05-12.
  4. "Node Shapes: HTML-Like Labels". graphviz.org. Retrieved 2017-05-12.
  5. "canviz: graphviz on a canvas". Retrieved 2017-06-02.
  6. "GitHub - magjac/d3-graphviz: Graphviz DOT rendering and animated transitions using D3". github.com. Retrieved 2018-06-06.
  7. "Import data in DOT language". vis.js. Retrieved 2018-12-22.
  8. "hpcc-js/wasm". Retrieved 2020-10-21.
  9. "ZGRViewer". zvtm.sourceforge.net. Retrieved 2017-05-12.
  10. "dot2tex – A Graphviz to LaTeX converter". dot2tex.readthedocs.io. 2019-11-01.
  11. "Data Visualization Software – Tulip". tulip.labri.fr. Retrieved 2017-05-12.
  12. "GitHub - gvhung/vizierfx: Automatically exported from code.google.com/p/vizierfx". github.com. Retrieved 2017-05-12.

See also
Wikimedia Commons has media related to DOT language.
This article is issued from Wikipedia. The text is licensed under Creative Commons - Attribution - Sharealike. Additional terms may apply for the media files.