Desulfovibrio
Desulfovibrio is a genus of Gram-negative sulfate-reducing bacteria. Desulfovibrio species are commonly found in aquatic environments with high levels of organic material, as well as in water-logged soils, and form major community members of extreme oligotrophic habitats such as deep granitic fractured rock aquifers.
| Desulfovibrio | |
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| Desulfovibrio vulgaris | |
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| Genus: | Desulfovibrio Kluyver & van Niel 1936 |
| Type species | |
| Desulfovibrio desulfuricans (Beijerinck 1895) Kluyver & van Niel 1936 | |
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High amounts of Desulfovibrio bacteria have been associated with inflammatory bowel disease, bacteremia infections and Parkinson's disease.[1][2]
Some Desulfovibrio species have in recent years been shown to have bioremediation potential for toxic radionuclides such as uranium by a reductive bioaccumulation process, such as converting highly water-soluble U(VI) to relatively insoluble U(IV) precipitate, thus removing the toxic uranium from contaminated water.[3]
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[4] and National Center for Biotechnology Information (NCBI)[5]
| 16S rRNA based LTP_01_2022[6][7][8] | 120 marker proteins based GTDB 07-RS207[9][10][11] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Unassigned species:
- "D. caledoniensis" Tardy-Jacquenod et al. 1996
- "D. cavernae" Sass & Cypionka 2004
- "D. diazotrophica" Sayavedra et al. 2021
- "D. halohydrocarbonoclasticus" Zobell 1947
- "D. hontreensis" Tarasov et al. 2015
- "D. lacusfryxellense" Sattley & Madigan 2010
- "D. multispirans" Czechowski et al. 1984
- "D. oliviopondense" Qatabi Sr. 2007
- "D. oryzae" Ouattara et al. 2000b
- "D. rubentschikii" (Baars 1930) ZoBell 1948
- "D. singaporenus" Sheng et al. 2007
References
- Hong-Xia Fan, Shuo Sheng, Feng Zhang (2022). "New hope for Parkinson's disease treatment: Targeting gut microbiota". CNS Neuroscience & Therapeutics. 28 (11): 1675–1688. doi:10.1111/cns.13916. PMC 9532916.
{{cite journal}}: CS1 maint: multiple names: authors list (link) - Li, Zhe; Liang, Hongfeng; Hu, Yingyu (2023). "Gut bacterial profiles in Parkinson's disease: A systematic review". CNS Neuroscience & Therapeutics. 29 (1): 140–157. doi:10.1111/cns.13990. PMC 9804059.
{{cite journal}}: CS1 maint: multiple names: authors list (link) - Lovley, Derek R.; Phillips, Elizabeth J. P. (November 1992). "Bioremediation of uranium contamination with enzymatic uranium reduction". Environmental Science & Technology. 26 (11): 2228–2234. doi:10.1021/es00035a023. ISSN 0013-936X.
- J.P. Euzéby. "Desulfovibrio". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2022-09-09.
- Sayers; et al. "Desulfovibrio". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2022-09-09.
- "The LTP". Retrieved 23 February 2022.
- "LTP_all tree in newick format". Retrieved 23 February 2022.
- "LTP_01_2022 Release Notes" (PDF). Retrieved 23 February 2022.
- "GTDB release 07-RS207". Genome Taxonomy Database. Retrieved 20 June 2022.
- "bac120_r207.sp_labels". Genome Taxonomy Database. Retrieved 20 June 2022.
- "Taxon History". Genome Taxonomy Database. Retrieved 20 June 2022.
- Madigan M; Martinko J, eds. (2005). Brock Biology of Microorganisms (11th ed.). Prentice Hall. ISBN 0-13-144329-1.
External links
- Amrani, Amira; Bergon, Aurelie; Holota, Helene; Tamburini, Christian; Garel, Marc; Ollivier, Bernard; Imbert, Jean; Dolla, Alain (12 September 2014). "Transcriptomics Reveal Several Gene Expression Patterns in the Piezophile Desulfovibrio hydrothermalis in Response to Hydrostatic Pressure". PLOS ONE. 9 (9): e106831. Bibcode:2014PLoSO...9j6831A. doi:10.1371/journal.pone.0106831. PMC 4162548. PMID 25215865.
- Czechowski, Melvin; Rossmore, H.W. (1981). Developments in Industrial Microbiology (PDF). Archived from the original (PDF) on 2010-01-03. Retrieved 2010-10-20.