SucA-II RNA motif

The sucA-II RNA motif is a conserved RNA structure identified by bioinformatics.[1] It is consistently found in the presumed 5' untranslated regions of sucA genes, which encode Oxoglutarate dehydrogenase enzymes that participate in the citric acid cycle. Given this arrangement, sucA-II RNAs might regulate the downstream sucA gene. This genetic arrangement is similar to the previously reported sucA RNA motif. However, sucA-II RNAs are found only in bacteria classified within the genus Pseudomonas, whereas the previously reported motif is found only in betaproteobacteria.

sucA-II RNA
Consensus secondary structure of sucA-II RNAs
Identifiers
Symbol	sucA-II RNA
Rfam	RF01758
Other data
RNA type	Cis-regulatory element
Domain(s)	Pseudomonas
PDB structures	PDBe