Arthrobacter luteus

"Arthrobacter luteus" (ALU) is a species of gram-positive bacteria in the genus Arthrobacter. "A. luteus" is facultatively anaerobic, pleomorphic, branching, non-motile, non-sporulating, non-acid-fast, catalase-positive, and rod-shaped (0.6–1.0 μm × 0.8–10.0 μm).[1]

Arthrobacter luteus
Scientific classification
Domain: Bacteria
Phylum: Actinomycetota
Class: Actinomycetia
Order: Micrococcales
Family: Micrococcaceae
Genus: Arthrobacter
Species:
A. luteus
Binomial name
Arthrobacter luteus
Kaneko et al. 1969[1]

A restriction endonuclease enzyme is extracted from the bacterium and acts at the centre of a palindromic tetranucleotide sequence to give even-ended duplex DNA fragments phosphorylated at the 5'-end. The restriction site Alu-I itself is a 4-base cutter: AG/CT.[2] The Alu retrotransposon is named after the bacterium's abbreviation. The bacterium is also used to produce zymolyase,[3] which can degrade yeast cell wall.

Background

"Arthrobacter luteus" was isolated from brewery sewage in research done in Takasaki, Japan in 1969. The team studied the bacteria isolated taxonomically and found them to be gram-positive, facultatively anaerobic, pleomorphic, branching, non-motile, non-sporulating, non-acid-fast, and catalase-positive rods. The bacteria also reduced nitrate, hydrolyzed starch and liquefied gelatin along with producing acids from carbohydrates. They then compared the isolated bacteria with 18 other strands of similar microorganisms and found to be in the genus Arthrobacter, but no specific species was corresponded. Thus, the name "Arthrobacter luteus" was given to the isolates.[4]

Research

An endonuclease restriction, which is a protein produced by bacteria that cleaves DNA at specific sites along the molecule,[5] that occurs from "Arthrobacter luteus" has been isolated and the nucleotide sequence at the cleave site of the restriction isolated. The cleavage occurs at the center of the palindromic tetranucleotide sequence, which gives even-ended duplex DNA fragments phosphorylated at the 5’-end. A palindromic tetranucleotide is a sequence with 4 nucleotides that are able to be read the same backward as it is forwards.[6] The restriction endonuclease cleaves SV40 form I DNA into 32 fragments, this is quite unusual since most others cleave much fewer than this. The Alu will then be used to digest the SV40 DNA. The fragments have been able to be arranged so that the physical cleavage map of the SV40 genome can be shown.[7]

Characteristics of Arthrobacter luteus

Morphological, physiological, and biochemical characteristics of "Arthrobacter luteus" are shown in the table below.

Test type Test Characteristics
Colony characters Color Yellow
Shape Rod
Temperature for growth (oC) 30-37
pH range for growth 7.0-8.0
NaCl tolerance (%, w/v) 7
Morphological characters Shape Rod-Coccus
Physiological characters Motility No
Growth at 6.5% NaCl Yes
Biochemical characters Gram staining +
Catalase +
Motility -
Indole -
Urease ±
Nitrate Reduction +
Hydrolysis of Gelatin +
Starch +
Acid production from Arabinose +
Xylose +
Glucose +
Mannose +
Fructose +
Galactose +
Lactose +
Maltose +
Saccharose +
Mannitol -
Glycerol +
Inulin +

Note:

+ = Positive

- = Negative

± = Slight Production

References

  1. Kaneko T, Kitamura K, Yamamoto Y. (1969). "Arthrobacter luteus nov. sp. Isolated From Brewery Sewage". Journal of General and Applied Microbiology. 15 (3): 317–326. doi:10.2323/jgam.15.317.
  2. Abdurashitov, Murat A.; Tomilov, Victor N.; Chernukhin, Valery A.; Degtyarev, Sergey (2008). "A physical map of human Alu repeats cleavage by restriction endonucleases". BMC Genomics. 9: 305. doi:10.1186/1471-2164-9-305. PMC 2443384. PMID 18578890.
  3. Kitamura, Kumpei; Kaneko, Tatsuhiko; Yamamoto, Yasushi (1974). "Lysis of viable yeast cells by enzymes of Arthrobacter luteus". The Journal of General and Applied Microbiology. 20 (6): 323–344. doi:10.2323/jgam.20.323.
  4. Kaneko, Tatsuhiko (Feb 8, 1969). "Arthrobacter luteus nov. sp. Isolated from Brewery Sewage". Gen. App. Microbiol. 15: 317–326 via J-Stage.
  5. "restriction enzyme | Definition, Function, & Types | Britannica". www.britannica.com. Retrieved 2022-04-21.
  6. "Definition of PALINDROME". www.merriam-webster.com. Retrieved 2022-03-12.
  7. Ernest, Jay (Feb 26, 2022). "Nucleotide sequence analysis of DNA. 28. Arthrobacter luteus restriction endonuclease recognition sequence and its cleavage map of SV40 DNA". Biochemistry. 15: 3612–3620 via ACS Publications.


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