National Center for Advancing and Translational Sciences Genetic and Rare Diseases Information Center, a program of the National Center for Advancing and Translational Sciences

Mosaic trisomy 9



Other Names:
Mosaic trisomy chromosome 9; Trisomy 9 mosaicism
Categories:

Mosaic trisomy 9 is a chromosomal abnormality that can affect may parts of the body. In people affected by this condition, some of the body's cells have three copies of chromosome 9 (trisomy), while other cells have the usual two copies of this chromosome. The signs and symptoms vary but may include mild to severe intellectual disability, developmental delay, growth problems (both before and after birth), congenital heart defects, and/or abnormalities of the craniofacial (skull and face) region. Most cases are not inherited; it often occurs sporadically as a random event during the formation of the reproductive cells (egg and sperm) or as the fertilized egg divides. Treatment is based on the signs and symptoms present in each person.[1][2][3]
Last updated: 1/18/2015

The signs and symptoms of mosaic trisomy 9 vary but may include:[1][2][3]
  • Different degrees of developmental delay and intellectual disability
  • Abnormal growth including low birth weight, failure to thrive, hypotonia (low muscle tone), and short stature
  • Characteristic craniofacial features such as microcephaly (unusually small head); a sloping forehead with narrow temples; a broad nose with a bulbous tip and "slitlike" nostrils; a small jaw; abnormally wide fontanelles at birth; cleft lip and/or palate; low-set, misshapen ears; microphthalmia (unusually small eyes) and/or short, upwardly slanting eyelid folds (palpebral fissures)
  • Vision problems
  • Congenital heart defects
  • Abnormalities of the muscles and/or bones such as congenital dislocation of the hips; abnormal position and/or limited function of the joints; underdevelopment of certain bones; and/or abnormal curvature of the spine
  • Unusually formed feet, such as club foot or "rocker bottom" feet
  • Abnormalities of the male reproductive system, including undescended testes, a small penis, and/or abnormal placement of the urinary opening
  • Kidney problems
  • Brain malformations such as hydrocephalus and/or Dandy-Walker malformation
Last updated: 1/15/2015

This table lists symptoms that people with this disease may have. For most diseases, symptoms will vary from person to person. People with the same disease may not have all the symptoms listed. This information comes from a database called the Human Phenotype Ontology (HPO) . The HPO collects information on symptoms that have been described in medical resources. The HPO is updated regularly. Use the HPO ID to access more in-depth information about a symptom.

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Medical Terms Other Names
Learn More:
HPO ID
80%-99% of people have these symptoms
Cryptorchidism
Undescended testes
Undescended testis
[ more ]
0000028
Global developmental delay 0001263
Intellectual disability
Mental deficiency
Mental retardation
Mental retardation, nonspecific
Mental-retardation
[ more ]
0001249
Low-set ears
Low set ears
Lowset ears
[ more ]
0000369
Microphthalmia
Abnormally small eyeball
0000568
30%-79% of people have these symptoms
Bulbous nose 0000414
Facial cleft
Cleft of the face
0002006
Finger clinodactyly 0040019
High palate
Elevated palate
Increased palatal height
[ more ]
0000218
Hip dislocation
Dislocated hips
Dislocation of hip
[ more ]
0002827
Hypoplasia of penis
Underdeveloped penis
0008736
Hypoplastic female external genitalia
Underdeveloped female external genitalia
0012815
Intrauterine growth retardation
Prenatal growth deficiency
Prenatal growth retardation
[ more ]
0001511
Large fontanelles
Wide fontanelles
0000239
Limitation of joint mobility
Decreased joint mobility
Decreased mobility of joints
Limited joint mobility
Limited joint motion
[ more ]
0001376
Micrognathia
Little lower jaw
Small jaw
Small lower jaw
[ more ]
0000347
Oligohydramnios
Low levels of amniotic fluid
0001562
Rocker bottom foot
Rocker bottom feet
Rocker-bottom feet
Rockerbottom feet
[ more ]
0001838
Short neck
Decreased length of neck
0000470
Talipes equinovarus
Club feet
Club foot
Clubfeet
Clubfoot
[ more ]
0001762
Ventricular septal defect
Hole in heart wall separating two lower heart chambers
0001629
5%-29% of people have these symptoms
Abnormal fallopian tube morphology 0011027
Abnormal heart valve morphology 0001654
Abnormal liver lobulation 0100752
Abnormal lung lobation 0002101
Abnormality of the uterus
Uterine abnormalities
Uterine malformations
[ more ]
0000130
Asplenia
Absent spleen
0001746
Atrial septal defect
An opening in the wall separating the top two chambers of the heart
Hole in heart wall separating two upper heart chambers
[ more ]
0001631
Biparietal narrowing 0004422
Camptodactyly of finger
Permanent flexion of the finger
0100490
Cleft palate
Cleft roof of mouth
0000175
Corneal opacity 0007957
Cystic hygroma 0000476
Dandy-Walker malformation 0001305
Deep palmar crease
Deep palm line
0006191
Deep plantar creases
Deep wrinkles in soles of feet
0001869
Dextrocardia
Heart tip and four chambers point towards right side of body
0001651
Elbow dislocation
Dislocations of the elbows
Elbow dislocations
[ more ]
0003042
Endocardial fibroelastosis 0001706
Hemivertebrae
Missing part of vertebrae
0002937
Horseshoe kidney
Horseshoe kidneys
0000085
Hydronephrosis 0000126
Hydrops fetalis 0001789
Hypertelorism
Wide-set eyes
Widely spaced eyes
[ more ]
0000316
Hypotelorism
Abnormally close eyes
Closely spaced eyes
[ more ]
0000601
Intestinal malrotation 0002566
Microcephaly
Abnormally small skull
Decreased circumference of cranium
Decreased size of skull
Reduced head circumference
Small head circumference
[ more ]
0000252
Micromelia
Smaller or shorter than typical limbs
0002983
Multiple renal cysts
Multiple kidney cysts
0005562
Patent ductus arteriosus 0001643
Polyhydramnios
High levels of amniotic fluid
0001561
Prominent occiput
Prominent back of the skull
Prominent posterior skull
[ more ]
0000269
Renal dysplasia 0000110
Scoliosis 0002650
Single umbilical artery
Only one artery in umbilical cord instead of two
0001195
Skeletal dysplasia 0002652
Small nail
Small nails
0001792
Spina bifida 0002414
Supernumerary ribs
Extra ribs
0005815
Upslanted palpebral fissure
Upward slanting of the opening between the eyelids
0000582
Webbed neck
Neck webbing
0000465
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Last updated: 7/1/2020

Most cases of mosaic trisomy 9 occur due to a random event during the formation of the reproductive cells (egg and sperm) or after fertilization has taken place. An error in cell division (called nondisjunction) may cause some eggs or sperm to have an abnormal number of chromosomes. If an egg or sperm with an extra chromosome 9 contributes to the genetic makeup of an embryo, the embryo will have an extra copy of chromosome 9 in each cell. As the embryo grows and divides, an attempt may be made to correct the mistake by eliminating one extra chromosome 9. In people with mosaic trisomy 9, this attempt may be partly successful, leaving some cells with an extra chromosome 9 and some cells with the extra chromosome deleted (the usual chromosome number). This correction process is called trisomy rescue.[1][2]

In other cases, the egg and sperm may have a normal number of chromosomes, but an error of cell division (nondisjunction) occurs when the fertilized egg is growing and dividing. If an error occurs during one of the divisions, it can cause some cells to have an abnormal number of chromosomes. In people affected by mosaic trisomy 9, some of the body's cells have the usual two copies of chromosome 9, and other cells have three copies of this chromosome (trisomy). The percentage of cells with trisomy 9 and which parts of the body are affected vary from person to person. This leads to variability in the range and severity of symptoms.[1][2]

In rare cases, mosaic trisomy 9 is inherited from a parent with a chromosomal rearrangement called a "pericentric inversion." This occurs when a segment of chromosome 9 has broken off in two places, swiveled round 180 degrees and reinserted itself into the chromosome. If this rearrangement is considered "balanced," meaning the piece of chromosome is in a different order but no genetic material is gained or lost, it usually does not cause any symptoms or health problems. However, it can be associated with an increased risk of having children with an abnormal number or chromosomes.[1][2]
Last updated: 1/15/2015

Mosaic trisomy 9 is usually not inherited. It often occurs sporadically as a random event during the formation of the reproductive cells (egg and sperm) or as the fertilized egg divides.[1][2]

In rare cases, mosaic trisomy 9 may be inherited from a parent with a chromosomal rearrangement called a "pericentric inversion." This occurs when a segment of chromosome 9 has broken off in two places, swiveled round 180 degrees and reinserted itself into the chromosome. In these cases, the parent has a "balanced" rearrangement, meaning the piece of chromosome is in a different order but no genetic material is gained or lost. Carriers of a balanced rearrangement typically to not have any symptoms or health problems. However, they may be at an increased risk of having children with an abnormal number or chromosomes.[1][2]
Last updated: 1/16/2015

In some cases, mosaic trisomy 9 is diagnosed before birth. A pregnancy ultrasound may reveal signs and symptoms that are suggestive of a chromosomal or developmental disorder. Additional tests, such as chorionic villus sampling (CVS) or an amniocentesis, may be offered to further investigate these features. During a CVS, a tissue sample from a portion of the placenta is removed and analyzed, while amniocentesis involves the removal of a sample of fluid that surrounds the developing baby. In both tests, the fluid or tissue sample is used to obtain a picture of the baby's chromosomes, which is called a karyotype. This may reveal mosaic trisomy 9.[1][2]

In other cases, the child is not diagnosed until after birth. Mosaic trisomy 9 may be suspected after characteristic signs and symptoms are identified on physical exam. A diagnosis can be confirmed by examining the child's chromosomes from a sample of blood.[2]
Last updated: 1/16/2015

Because mosaic trisomy 9 affects many different systems of the body, medical management is often provided by a team of doctors and other healthcare professionals. Treatment for this condition varies based on the signs and symptoms present in each person. For example, children with bone or muscle abnormalities and/or delayed motor milestones (i.e. walking) may be referred for physical or occupational therapy. Depending on the degree of intellectual disability, a child may require special education classes. Heart defects and cleft lip and/or palate may need to be surgically repaired. Children with hydrocephalus may be treated with certain medications and/or shunting (placement of a specialized device that drains excess fluid away from the brain). Other surgeries may be recommended depending on the nature and severity of the other features (i.e. craniofacial, muscular, skeletal, kidney, and/or reproductive system problems) and their associated symptoms.[1][2]
Last updated: 1/18/2015

The long-term outlook (prognosis) for people with mosaic trisomy 9 largely depends on the degree to which the condition has affected any major organs, such as the heart and/or brain. In people affected by mosaic trisomy 9, some of the body's cells have the usual two copies of chromosome 9, and other cells have three copies of this chromosome (trisomy). The percentage of cells with trisomy 9 and which parts of the body are affected vary from person to person. This leads to variability in the range and severity of symptoms.[2]
Last updated: 1/18/2015

Research helps us better understand diseases and can lead to advances in diagnosis and treatment. This section provides resources to help you learn about medical research and ways to get involved.

Patient Registry

  • The Tracking Rare Incidence Syndromes (TRIS) project seeks to increase the knowledge base on rare incidence trisomy conditions, and to make this information available to families and interested educational, medical and therapeutic professionals.

    TRIS Project
    Deborah A. Bruns, Ph.D., Principal Investigator
    Counseling, Quantitative Methods, and Special Education
    Wham Building, Room 223 MC 4618
    Carbondale, IL 62901
    Phone: 618-453-2311
    E-mail: tris@siu.edu

Support and advocacy groups can help you connect with other patients and families, and they can provide valuable services. Many develop patient-centered information and are the driving force behind research for better treatments and possible cures. They can direct you to research, resources, and services. Many organizations also have experts who serve as medical advisors or provide lists of doctors/clinics. Visit the group’s website or contact them to learn about the services they offer. Inclusion on this list is not an endorsement by GARD.

Organizations Supporting this Disease


These resources provide more information about this condition or associated symptoms. The in-depth resources contain medical and scientific language that may be hard to understand. You may want to review these resources with a medical professional.

Where to Start

  • Genetics Home Reference (GHR) contains information on Mosaic trisomy 9. This website is maintained by the National Library of Medicine.
  • The National Organization for Rare Disorders (NORD) has a report for patients and families about this condition. NORD is a patient advocacy organization for individuals with rare diseases and the organizations that serve them.
  • Unique is a source of information and support to families and individuals affected by rare chromosome disorders. Click on the link to view information about trisomy 9 mosaicism.

In-Depth Information

  • The Monarch Initiative brings together data about this condition from humans and other species to help physicians and biomedical researchers. Monarch’s tools are designed to make it easier to compare the signs and symptoms (phenotypes) of different diseases and discover common features. This initiative is a collaboration between several academic institutions across the world and is funded by the National Institutes of Health. Visit the website to explore the biology of this condition.
  • Orphanet is a European reference portal for information on rare diseases and orphan drugs. Access to this database is free of charge.
  • PubMed is a searchable database of medical literature and lists journal articles that discuss Mosaic trisomy 9. Click on the link to view a sample search on this topic.

Questions sent to GARD may be posted here if the information could be helpful to others. We remove all identifying information when posting a question to protect your privacy. If you do not want your question posted, please let us know.


  1. Trisomy 9 Mosaicism. Unique. 2001; http://www.rarechromo.org/information/Chromosome%20%209/Trisomy%209%20mosaicism%20FTNW.pdf.
  2. CHROMOSOME 9, TRISOMY MOSAIC. NORD. May 2008; https://www.rarediseases.org/rare-disease-information/rare-diseases/byID/1035/viewAbstract.
  3. Zen PR, Rosa RF, Rosa RC, Graziadio C, Paskulin GA.. New report of two patients with mosaic trisomy 9 presenting unusual features and longer survival. Sao Paulo Med J. December 2011; 129(6):428-432.