Haplogroup Q-L275

Haplogroup Q-L275 or Q2
Haplogroup Q-L275 or Q2
Possible place of origin	Eurasia
Ancestor	Q-M242
Descendants	Q-M378
Defining mutations	L275, L314, L606, L612

Haplogroup Q-L275 or Haplogroup Q2 (formerly Haplogroup Q1b) is a human Y-chromosome DNA haplogroup believed to have originated in Eurasia. Haplogroup Q-L275 is defined by the presence of the L275 single-nucleotide polymorphism (SNP). Haplogroup Q-L275 can be identified through genealogical DNA testing.

Distribution

Q-L275 has descendants across Europe, Central Asia, and South Asia. Q-M378 is phylogeographically restricted to southwest Asia.[1]

The Americas

Q-L275 has not been identified in pre-Columbian groups in the Americas, but is sporadically found among modern Native Americans. Potential sources in indigenous populations are European colonists and religious missionaries. According to Batfaglia, et al, Q-M378 in Native American populations can be attributed to historical migrants from Southwest Asia in the modern historical period.[1]

South Asia

The problematic phylogeny sampling of early studies has been demonstrated by subsequent studies that have found the Q-M378 descendant branch in South Asia.

West Asia

According to Behar et al. 5% of Ashkenazi males belong to haplogroup Q.[2] This has subsequently been found to be entirely Q-L275's Q-M378 subclade and is further restricted to the Q-L245 branch.

Subclade Distribution

Q-L245 This branch was discovered by citizen scientists. It is a descendant branch of the Q-M378 lineage and is the most common branch in West Asian groups such as Iranians and Jewish populations.

Q-L272.1 This branch was discovered by citizen scientists. It has only been identified in one Sicilian sample.

Q-L301 This branch was discovered by citizen scientists. They have identified it in two unrelated Iranian samples.

Q-L315 This branch was discovered by citizen scientists. It has only been identified in one Ashkenazi Jewish sample. Thus, it is presumed to have arisen after the Q-L245 branch to which it belongs became part of the pre-Diaspora Jewish population.

Q-L327 This branch was discovered by citizen scientists. It has only been identified in one Azorean sample.

Q-L619.2 This branch was discovered by citizen scientists. They have identified it in two unrelated Armenian samples.

Q-P306 This branch was discovered by the University of Arizona research group headed by Dr. Michael Hammer in a Southeast Asian sample. It has been identified by citizen scientists in South Asians.

Q-M378 — It is widely distributed in Europe, South Asia, and West Asia. It is found among samples of Hazaras and Sindhis.[3] It has been found in one individual in a small sample of eleven Lachungpa in Sikkim.[4] It is also found in the Uyghurs of North-Western China in two separate groups.[5] Some Western Jews belong to Q-M378 as well. Q-M378's subbranch Q-L245's subclades Q-Y2200 and Q-YP1035 are the only varieties of haplogroup Q that are found in Ashkenazi Jews.[6] Citizen scientists found that some Sephardic Jews carry different subclades of Q-L245, including Q-BZ3900, Q-YP745, and Q-YP1237.

Associated SNPs

Q-L275 is currently defined by the SNPs L275, L314, L606, and L612.

Subgroups

This is Thomas Krahn at the Genomic Research Center's Draft tree Proposed Tree for haplogroup Q-L275.

L275, L314, L606, L612
- M378, L214, L215
  - L245
    - L272.1
    - L315
    - L619.2
  - L301
  - P306
  - L327

References

Battaglia, Vincenza; Grugni, Viola; Perego, Ugo Alessandro; Angerhofer, Norman; Gomez-Palmieri, J. Edgar; Woodward, Scott Ray; Achilli, Alessandro; Myres, Natalie; Torroni, Antonio; Semino, Ornella (21 August 2013). "The First Peopling of South America: New Evidence from Y-Chromosome Haplogroup Q". PLOS ONE. 8 (8): e71390. doi:10.1371/journal.pone.0071390. ISSN 1932-6203. PMC 3749222. "Only two American Y chromosomes did not cluster into the L54 sub-branch. They were both M378-positive, thus belonging to Q1b, a finding never previously reported for Native Americans. Considering that the phylogeography of this infrequent haplogroup is restricted to South West Asia [52]–[55], the most likely interpretation of this outcome is that they represent an arrival from Asia in contemporary history. For this reason the two Y chromosomes were not included in subsequent analyses."
Behar, Doron M.; Garrigan, Daniel; Kaplan, Matthew E.; Mobasher, Zahra; Rosengarten, Dror; Karafet, Tatiana M.; Quintana-Murci, Lluis; Ostrer, Harry; Skorecki, Karl (2004). "Contrasting patterns of Y chromosome variation in Ashkenazi Jewish and host non-Jewish European populations". Human Genetics. 114 (4): 354–65. doi:10.1007/s00439-003-1073-7. PMID 14740294. S2CID 10310338.
Sengupta, Sanghamitra; Zhivotovsky, Lev A.; King, Roy; Mehdi, S.Q.; Edmonds, Christopher A.; Chow, Cheryl-Emiliane T.; Lin, Alice A.; Mitra, Mitashree; Sil, Samir K. (2006). "Polarity and Temporality of High-Resolution Y-Chromosome Distributions in India Identify Both Indigenous and Exogenous Expansions and Reveal Minor Genetic Influence of Central Asian Pastoralists". The American Journal of Human Genetics. 78 (2): 202–21. doi:10.1086/499411. PMC 1380230. PMID 16400607.
Monojit Debnath; Malliya G Palanichamy; Bikash Mitra; Jie-Qiong Jin; Tapas K Chaudhuri; Ya-Ping Zhang (2011). "Y-chromosome haplogroup diversity in the sub-Himalayan Terai and Duars populations of East India". Journal of Human Genetics. 56 (11): 765–771. doi:10.1038/jhg.2011.98. PMID 21900945.
Zhong, H.; Shi, H.; Qi, X.-B.; Duan, Z.-Y.; Tan, P.-P.; Jin, L.; Su, B.; Ma, R. Z. (2010). "Extended Y Chromosome Investigation Suggests Postglacial Migrations of Modern Humans into East Asia via the Northern Route". Molecular Biology and Evolution. 28 (1): 717–27. doi:10.1093/molbev/msq247. PMID 20837606.
Brook, Kevin Alan (2018). The Jews of Khazaria, Third Edition. Lanham, MD: Rowman & Littlefield. p. 204. ISBN 9781538103425.

External links

The Y-DNA Haplogroup Q Project

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[vanOven2014-7] Van Oven M, Van Geystelen A, Kayser M, Decorte R, Larmuseau HD (2014). "Seeing the wood for the trees: a minimal reference phylogeny for the human Y chromosome". Human Mutation. 35 (2): 187–91. doi:10.1002/humu.22468. PMID 24166809. S2CID 23291764.

[ISOGG2015-8] International Society of Genetic Genealogy (ISOGG; 2015), Y-DNA Haplogroup Tree 2015. (Access date: 1 February 2015.)

[A0-T-9] Haplogroup A0-T is also known as A-L1085 (and previously as A0'1'2'3'4).

[A1-10] Haplogroup A1 is also known as A1'2'3'4.

[LT-11] Haplogroup LT (L298/P326) is also known as Haplogroup K1.

[K2-12] Between 2002 and 2008, Haplogroup T-M184 was known as "Haplogroup K2". That name has since been re-assigned to K-M526, the sibling of Haplogroup LT.

[K2a-13] Haplogroup K2a (M2308) and its primary subclade K-M2313 were separated from Haplogroup NO (F549) in 2016. (This followed the publication of: Poznik GD, Xue Y, Mendez FL, et al. (2016). "Punctuated bursts in human male demography inferred from 1,244 worldwide Y-chromosome sequences". Nature Genetics. 48 (6): 593–9. doi:10.1038/ng.3559. PMC 4884158. PMID 27111036. In the past, other haplogroups, including NO (M214) and K2e had also been identified with the name "K2a".

[K2b-14] Haplogroup K2b (M1221/P331/PF5911) is also known as Haplogroup MPS.

[K2e-15] Haplogroup K2e (K-M147) was previously known as "Haplogroup X" and "K2a" (but is a sibling subclade of the present K2a).

[K-M2313-16] K-M2313*, which as yet has no phylogenetic name, has been documented in two living individuals, who have ethnic ties to India and South East Asia. In addition, K-Y28299, which appears to be a primary branch of K-M2313, has been found in three living individuals from India. See: Poznik op. cit.; YFull YTree v5.08, 2017, "K-M2335", and; PhyloTree, 2017, "Details of the Y-SNP markers included in the minimal Y tree" (Access date of these pages: 9 December 2017)

[K2b1-17] Haplogroup K2b1 (P397/P399) is also known as Haplogroup MS, but has a broader and more complex internal structure.

[P-18] Haplogroup P (P295) is also klnown as K2b2.

[S-19] Haplogroup S, as of 2017, is also known as K2b1a. (Previously the name Haplogroup S was assigned to K2b1a4.)

[M-20] Haplogroup M, as of 2017, is also known as K2b1b. (Previously the name Haplogroup M was assigned to K2b1d.)

[Battaglia-1] Battaglia, Vincenza; Grugni, Viola; Perego, Ugo Alessandro; Angerhofer, Norman; Gomez-Palmieri, J. Edgar; Woodward, Scott Ray; Achilli, Alessandro; Myres, Natalie; Torroni, Antonio; Semino, Ornella (21 August 2013). "The First Peopling of South America: New Evidence from Y-Chromosome Haplogroup Q". PLOS ONE. 8 (8): e71390. doi:10.1371/journal.pone.0071390. ISSN 1932-6203. PMC 3749222. "Only two American Y chromosomes did not cluster into the L54 sub-branch. They were both M378-positive, thus belonging to Q1b, a finding never previously reported for Native Americans. Considering that the phylogeography of this infrequent haplogroup is restricted to South West Asia [52]–[55], the most likely interpretation of this outcome is that they represent an arrival from Asia in contemporary history. For this reason the two Y chromosomes were not included in subsequent analyses."

[behar2003-2] Behar, Doron M.; Garrigan, Daniel; Kaplan, Matthew E.; Mobasher, Zahra; Rosengarten, Dror; Karafet, Tatiana M.; Quintana-Murci, Lluis; Ostrer, Harry; Skorecki, Karl (2004). "Contrasting patterns of Y chromosome variation in Ashkenazi Jewish and host non-Jewish European populations". Human Genetics. 114 (4): 354–65. doi:10.1007/s00439-003-1073-7. PMID 14740294. S2CID 10310338.

[Sengupta2006-3] Sengupta, Sanghamitra; Zhivotovsky, Lev A.; King, Roy; Mehdi, S.Q.; Edmonds, Christopher A.; Chow, Cheryl-Emiliane T.; Lin, Alice A.; Mitra, Mitashree; Sil, Samir K. (2006). "Polarity and Temporality of High-Resolution Y-Chromosome Distributions in India Identify Both Indigenous and Exogenous Expansions and Reveal Minor Genetic Influence of Central Asian Pastoralists". The American Journal of Human Genetics. 78 (2): 202–21. doi:10.1086/499411. PMC 1380230. PMID 16400607.

[Debnath2011-4] Monojit Debnath; Malliya G Palanichamy; Bikash Mitra; Jie-Qiong Jin; Tapas K Chaudhuri; Ya-Ping Zhang (2011). "Y-chromosome haplogroup diversity in the sub-Himalayan Terai and Duars populations of East India". Journal of Human Genetics. 56 (11): 765–771. doi:10.1038/jhg.2011.98. PMID 21900945.

[Zhong2010-5] Zhong, H.; Shi, H.; Qi, X.-B.; Duan, Z.-Y.; Tan, P.-P.; Jin, L.; Su, B.; Ma, R. Z. (2010). "Extended Y Chromosome Investigation Suggests Postglacial Migrations of Modern Humans into East Asia via the Northern Route". Molecular Biology and Evolution. 28 (1): 717–27. doi:10.1093/molbev/msq247. PMID 20837606.

[Brook2018-6] Brook, Kevin Alan (2018). The Jews of Khazaria, Third Edition. Lanham, MD: Rowman & Littlefield. p. 204. ISBN 9781538103425.