Acidimicrobiia

The Acidimicrobiia are a class of Actinomycetota, in which three families, eight genera, and nine species have been described, Acidimicrobium ferrooxidans is the type species of the order.[2]

Acidimicrobiia
Acidimicrobium ferrooxidans
Scientific classification Edit this classification
Domain: Bacteria
Phylum: Actinomycetota
Norris 2013[1]
Class: Acidimicrobiia
Stackebrandt et al. 1997[2]
Type genus
Acidimicrobium
Clark and Norris 1996
Families[3]
Synonyms
  • Acidimicrobiidae Rainey & Ward-Rainey 1997
  • "Actinomarinidae" Ghai et al. 2013

Phylogeny

MLST based phylogeny of 30 proteins.[4] 16S rRNA based LTP_12_2021[5][6][7] GTDB 07-RS207 by Genome Taxonomy Database[8][9][10]
Acidimicrobiales

Aciditerrimonas

Acidimicrobiaceae

"Acidithrix"

Ferrithrix

Ferrimicrobium

Acidimicrobium

Iamiaceae

Aquihabitans

Iamia

Ilumatobacteraceae

Ilumatobacter

"Microtrichaceae"

"Ca. Limnosphaera"

"Ca. Neomicrothrix"

Acidimicrobiales
Acidimicrobiaceae

Acidiferrimicrobium

Aciditerrimonas

Acidimicrobium

Ferrimicrobium

Ferrithrix

Iamiaceae

Aquihabitans

Rhabdothermincola

Actinomarinicola

Iamia

Ilumatobacteraceae

Desertimonas

Ilumatobacter

Acidimicrobiia
"Actinomarinales"
"Actinomarinaceae"

Ca. "Actinomarina"

Acidimicrobiales
Acidimicrobiaceae

"Acidithrix"

Ferrithrix

Ferrimicrobium

Acidimicrobium

Ilumatobacteraceae

Desertimonas

Ilumatobacter

JAAYBP01

Aquihabitans

Actinomarinicola

Rhabdothermincola

"Microtrichaceae"

"Ca. Neomicrothrix"

Taxonomy

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[3] and National Center for Biotechnology Information (NCBI).[11]

  • Order "Actinomarinales" Ghai et al. 2013
    • Family "Actinomarinaceae" Ghai et al. 2013
      • Genus "Candidatus Actinomarina" Ghai et al. 2013
  • Order Acidimicrobiales Stackebrandt, Rainey & Ward-Rainey 1997
    • Genus ?Acidithiomicrobium Davis-Belmar & Norris 2009
    • Family Acidimicrobiaceae Stackebrandt, Rainey & Ward-Rainey 1997
    • Family Iamiaceae Iamiaceae
      • Genus Actinomarinicola He et al. 2020
      • Genus Aquihabitans Jin et al. 2013
      • Genus Iamia Kurahashi et al. 2009
      • Genus Rhabdothermincola Liu et al. 2021
    • Family Ilumatobacteraceae Asem et al. 2018
      • Genus Desertimonas Asem et al. 2018
      • Genus Ilumatobacter Matsumoto et al. 2009
    • Family "Microtrichaceae" Joseph et al. 2003
      • Genus ?"Candidatus Limnosphaera" Kim, Kang & Cho 2017
      • Genus "Candidatus Neomicrothrix" corrig. Blackall et al. 1996 ["Ca. Microthrix" Blackall et al. 1996 non Ragonot 1888]

See also

References

  1. Norris PR (2012). "Class II. Acidimicrobiia class. nov.". In Goodfellow M, Kämpfer P, Trujillo ME, Ludwig W, Whitman WB (eds.). Bergey's Manual of Systematic Bacteriology. Vol. 5 (The Actinobacteria), part B (2nd ed.). New York: Springer. p. 1968.
  2. Stackebrandt E, Rainey FA, Ward-Rainey NL (1997). "Proposal for a new hierarchic classification system, Actinobacteria classis nov". Int. J. Syst. Bacteriol. 47: 479–491.
  3. Euzéby JP, Parte AC. "Acidimicrobiia". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved June 22, 2021.
  4. Hu D, Cha G, Gao B. (2018). "A phylogenomic and molecular markers-based analysis of the class Acidimicrobiia". Frontiers in Microbiology. 9: 987. doi:10.3389/fmicb.2018.00987. PMC 5962788. PMID 29867887.
  5. "The LTP". Retrieved 23 February 2021.
  6. "LTP_all tree in newick format". Retrieved 23 February 2021.
  7. "LTP_12_2021 Release Notes" (PDF). Retrieved 23 February 2021.
  8. "GTDB release 07-RS207". Genome Taxonomy Database. Retrieved 20 June 2022.
  9. "ar53_r207.sp_label". Genome Taxonomy Database. Retrieved 20 June 2022.
  10. "Taxon History". Genome Taxonomy Database. Retrieved 20 June 2022.
  11. Sayers; et al. "Acidimicrobiia". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2021-03-20.


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