PCDH12

Protocadherin-12 is a protein that in humans is encoded by the PCDH12 gene.[5][6][7]

PCDH12
Identifiers
AliasesPCDH12, VE-cadherin-2, VECAD2, protocadherin 12, DMJDS1
External IDsOMIM: 605622 MGI: 1855700 HomoloGene: 9574 GeneCards: PCDH12
Orthologs
SpeciesHumanMouse
Entrez

51294

53601

Ensembl

ENSG00000113555

ENSMUSG00000024440

UniProt

Q9NPG4

O55134

RefSeq (mRNA)

NM_016580

NM_017378

RefSeq (protein)

NP_057664

NP_059074

Location (UCSC)Chr 5: 141.94 – 141.97 MbChr 18: 38.4 – 38.42 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

This gene belongs to the protocadherin gene family, a subfamily of the cadherin superfamily. The encoded protein consists of an extracellular domain containing 6 cadherin repeats, a transmembrane domain and a cytoplasmic tail that differs from those of the classical cadherins. The gene localizes to the region on chromosome 5 where the protocadherin gene clusters reside. The exon organization of this transcript is similar to that of the gene cluster transcripts, notably the first large exon, but no significant sequence homology exists. The function of this cellular adhesion protein is undetermined but mouse protocadherin 12 does not bind catenins and appears to have no effect on cell migration or growth.[7]

References

  1. GRCh38: Ensembl release 89: ENSG00000113555 - Ensembl, May 2017
  2. GRCm38: Ensembl release 89: ENSMUSG00000024440 - Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. Wu Q, Maniatis T (Apr 2000). "Large exons encoding multiple ectodomains are a characteristic feature of protocadherin genes". Proc Natl Acad Sci U S A. 97 (7): 3124–9. doi:10.1073/pnas.060027397. PMC 16203. PMID 10716726.
  6. Wu Q, Maniatis T (Jul 1999). "A striking organization of a large family of human neural cadherin-like cell adhesion genes". Cell. 97 (6): 779–90. doi:10.1016/S0092-8674(00)80789-8. PMID 10380929. S2CID 6014717.
  7. "Entrez Gene: PCDH12 protocadherin 12".

Further reading


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