Armatimonadota

Armatimonadota
Scientific classification
Domain:
Bacteria
(unranked):
Terrabacteria
Phylum:
Armatimonadota

Tamaki et al. 2021[1]
Class
  • Fimbriimonadia
  • Armatimonadia
  • Chthonomonadetes
Synonyms
  • Candidate division OP10
  • "Armatimonadetes" Tamaki et al. 2011
  • "Armatimonadaeota" Oren et al. 2015
  • "Armatimonadota" Whitman et al. 2018

Armatimonadota is a phylum of gram-negative bacteria.

History

Armatimonadota was originally described solely on the basis of environmental 16S rRNA gene clone sequences, and was temporarily titled candidate phylum OP10. However, in 2011 a bacterial strain belonging to the phylum was isolated from an aquatic plant in Japan. The species was named Armatimonas rosea and was the first member of its phylum, genus, and species.[2]

Members

Armatimonas rosea, an aerobic chemoheterotrophic bacterium, strain YO-36T, was isolated from rhizoplane of an aquatic plant (a reed, Phragmites australis) inhabiting a freshwater lake in Japan.[2]

Chthonomonas calidirosea, an aerobic, saccharolytic, obligately thermophilic, motile, non-spore-forming bacterium, strain T49(T), was isolated from geothermally heated soil at Hell's Gate, Tikitere, New Zealand.[3]

Phylogeny

16S rRNA-based LTP release 123 by The All-Species Living Tree Project.[4] Annotree[5] and GTDB release 05-RS95 (17 July 2020).[6]
Armatimonadota
 

Fimbriimonas ginsengisoli

 
 
 

Chthonomonas calidirosea

 
 

Armatimonas rosea

 
 
 
Armatimonadota
"Abditibacteriia"

Abditibacterium utsteinense

 
 
 
 

Fimbriimonas ginsengisoli

 
 

Chthonomonas calidirosea

 
 
"Armatimonadia"
 

Armatimonas rosea

 
 

Capsulimonas corticalis

 
 
 
 

Taxonomy

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[7] and National Center for Biotechnology Information (NCBI).[8]

  • Class Chthonomonadetes Lee et al. 2011
    • Order Chthonomonadales Lee et al. 2011
      • Family Chthonomonadaceae Lee et al. 2011
  • Class Fimbriimonadia Im et al. 2012
    • Order Fimbriimonadales Im et al. 2012
  • Class Armatimonadia Tamaki et al. 2011
    • Order Armatimonadales Tamaki et al. 2011
      • Family Armatimonadaceae Tamaki et al. 2011
    • Order Capsulimonadales Li, Kudo & Tonouchi 2018
      • Family Capsulimonadaceae Li, Kudo & Tonouchi 2018
        • Genus Capsulimonas Li, Kudo & Tonouchi 2018
          • Species Capsulimonas corticalis Li, Kudo & Tonouchi 2018

Notes

    References

    1. ↑ Oren A, Garrity GM (2021). "Valid publication of the names of forty-two phyla of prokaryotes". Int J Syst Evol Microbiol. 71 (10): 5056. doi:10.1099/ijsem.0.005056. PMID 34694987.
    2. 1 2 Tamaki, Hideyuki; Tanaka, Yasuhiro; Matsuzawa, Hiroaki; Muramatsu, Mizuho; Meng, Xian-Ying; Hanada, Satoshi; Mori, Kazuhiro; Kamagata, Yoichi (2010). "Armatimonas rosea gen. nov., sp. nov., a Gram-negative, aerobic, chemoheterotrophic bacterium of a novel bacterial phylum, Armatimonadetes phyl. nov., formally called the candidate phylum OP10". International Journal of Systematic and Evolutionary Microbiology. 61 (Pt 6): 1442–7. doi:10.1099/ijs.0.025643-0. PMID 20622056.
    3. ↑ Lee, Kevin C. Y.; Dunfield, Peter F.; Morgan, Xochitl C.; Crowe, Michelle A.; Houghton, Karen M.; Vyssotski, Mikhail; Ryan, Jason L. J.; Lagutin, Kirill; et al. (2010). "Chthonomonas calidirosea gen. nov., sp. nov., an aerobic, pigmented, thermophilic microorganism of a novel bacterial class, Chthonomonadetes classis. nov., of the newly described phylum Armatimonadetes originally designated candidate division OP10". International Journal of Systematic and Evolutionary Microbiology. 61 (Pt 10): 2482–90. doi:10.1099/ijs.0.027235-0. PMID 21097641.
    4. ↑ All-Species Living Tree Project."16S rRNA-based LTP release 123 (full tree)" (PDF). Silva Comprehensive Ribosomal RNA Database. Retrieved 2014-03-20.
    5. ↑ Mendler, K; Chen, H; Parks, DH; Hug, LA; Doxey, AC (2019). "AnnoTree: visualization and exploration of a functionally annotated microbial tree of life". Nucleic Acids Research. 47: 4442–4448. doi:10.1093/nar/gkz246. PMC 6511854.
    6. ↑ cite website |title=GTDB release 05-RS95 |url=https://gtdb.ecogenomic.org/about#4%7C |website=Genome Taxonomy Database
    7. ↑ J.P. Euzéby. "Armatimonadetes". List of Prokaryotic names with Standing in Nomenclature (LPSN). Archived from the original on 2011-06-13. Retrieved 2016-03-20.
    8. ↑ Sayers; et al. "Armatimonadetes". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2016-03-20.
    This article is issued from Offline. The text is licensed under Creative Commons - Attribution - Sharealike. Additional terms may apply for the media files.