Acidimicrobiia
The Acidimicrobiia are a class of Actinomycetota, in which three families, eight genera, and nine species have been described, Acidimicrobium ferrooxidans is the type species of the order.[2]
| Acidimicrobiia | |
|---|---|
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| Acidimicrobium ferrooxidans | |
Scientific classification  | |
| Domain: | Bacteria |
| Phylum: | Actinomycetota Norris 2013[1] |
| Class: | Acidimicrobiia Stackebrandt et al. 1997[2] |
| Type genus | |
| Acidimicrobium Clark and Norris 1996 | |
| Families[3] | |
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| Synonyms | |
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Phylogeny
| MLST based phylogeny of 30 proteins.[4] | 16S rRNA based LTP_12_2021[5][6][7] | GTDB 07-RS207 by Genome Taxonomy Database[8][9][10] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Taxonomy
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[3] and National Center for Biotechnology Information (NCBI).[11]
- Order "Actinomarinales" Ghai et al. 2013
- Family "Actinomarinaceae" Ghai et al. 2013
- Genus "Candidatus Actinomarina" Ghai et al. 2013
- Family "Actinomarinaceae" Ghai et al. 2013
- Order Acidimicrobiales Stackebrandt, Rainey & Ward-Rainey 1997
- Genus ?Acidithiomicrobium Davis-Belmar & Norris 2009
- Family Acidimicrobiaceae Stackebrandt, Rainey & Ward-Rainey 1997
- Genus ?Acidiferrimicrobium González et al. 2020
- Genus ?Aciditerrimonas Itoh et al. 2011
- Genus Acidimicrobium Clark & Norris 1996
- Genus "Acidithrix" Kay et al. 2013/Jones & Johnson 2015
- Genus Ferrimicrobium Johnson et al. 2009
- Genus Ferrithrix Johnson et al. 2009
- Family Iamiaceae Iamiaceae
- Genus Actinomarinicola He et al. 2020
- Genus Aquihabitans Jin et al. 2013
- Genus Iamia Kurahashi et al. 2009
- Genus Rhabdothermincola Liu et al. 2021
- Family Ilumatobacteraceae Asem et al. 2018
- Genus Desertimonas Asem et al. 2018
- Genus Ilumatobacter Matsumoto et al. 2009
- Family "Microtrichaceae" Joseph et al. 2003
- Genus ?"Candidatus Limnosphaera" Kim, Kang & Cho 2017
- Genus "Candidatus Neomicrothrix" corrig. Blackall et al. 1996 ["Ca. Microthrix" Blackall et al. 1996 non Ragonot 1888]
See also
References
- Norris PR (2012). "Class II. Acidimicrobiia class. nov.". In Goodfellow M, Kämpfer P, Trujillo ME, Ludwig W, Whitman WB (eds.). Bergey's Manual of Systematic Bacteriology. Vol. 5 (The Actinobacteria), part B (2nd ed.). New York: Springer. p. 1968.
- Stackebrandt E, Rainey FA, Ward-Rainey NL (1997). "Proposal for a new hierarchic classification system, Actinobacteria classis nov". Int. J. Syst. Bacteriol. 47: 479–491.
- Euzéby JP, Parte AC. "Acidimicrobiia". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved June 22, 2021.
- Hu D, Cha G, Gao B. (2018). "A phylogenomic and molecular markers-based analysis of the class Acidimicrobiia". Frontiers in Microbiology. 9: 987. doi:10.3389/fmicb.2018.00987. PMC 5962788. PMID 29867887.
- "The LTP". Retrieved 23 February 2021.
- "LTP_all tree in newick format". Retrieved 23 February 2021.
- "LTP_12_2021 Release Notes" (PDF). Retrieved 23 February 2021.
- "GTDB release 07-RS207". Genome Taxonomy Database. Retrieved 20 June 2022.
- "ar53_r207.sp_label". Genome Taxonomy Database. Retrieved 20 June 2022.
- "Taxon History". Genome Taxonomy Database. Retrieved 20 June 2022.
- Sayers; et al. "Acidimicrobiia". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2021-03-20.
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