Armatimonadota

Armatimonadota is a phylum of gram-negative bacteria.

Armatimonadota
Scientific classification
Domain: Bacteria
(unranked): Terrabacteria
Phylum: Armatimonadota
Tamaki et al. 2021[1]
Class
  • Fimbriimonadia
  • Armatimonadia
  • Chthonomonadetes
Synonyms
  • Candidate division OP10
  • "Armatimonadetes" Tamaki et al. 2011
  • "Armatimonadaeota" Oren et al. 2015
  • "Armatimonadota" Whitman et al. 2018

History

Armatimonadota was originally described solely on the basis of environmental 16S rRNA gene clone sequences, and was temporarily titled candidate phylum OP10. However, in 2011 a bacterial strain belonging to the phylum was isolated from an aquatic plant in Japan. The species was named Armatimonas rosea and was the first member of its phylum, genus, and species.[2]

Members

Armatimonas rosea, an aerobic chemoheterotrophic bacterium, strain YO-36T, was isolated from rhizoplane of an aquatic plant (a reed, Phragmites australis) inhabiting a freshwater lake in Japan.[2]

Chthonomonas calidirosea, an aerobic, saccharolytic, obligately thermophilic, motile, non-spore-forming bacterium, strain T49(T), was isolated from geothermally heated soil at Hell's Gate, Tikitere, New Zealand.[3]

Phylogeny
16S rRNA based LTP_12_2021[4][5][6] GTDB 07-RS207 by Genome Taxonomy Database[7][8][9]
Armatimonadota
"Chthonomonadia"

Chthonomonas calidirosea

 
 
Fimbriimonadia

Fimbriimonas ginsengisoli

 
Armatimonadia
 

Armatimonas rosea

 
 

Capsulimonas corticalis

 
 
 
 
Armatimonadota
Abditibacteriia

Abditibacterium utsteinense

 
 
Fimbriimonadia

Fimbriimonas ginsengisoli

 
 
"Chthonomonadia"

Chthonomonas calidirosea

 
Armatimonadia
 

Armatimonas rosea

 
 

Capsulimonas corticalis

 
 
 
 
 

Taxonomy

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[10] and National Center for Biotechnology Information (NCBI).[11]

  • Genus "Candidatus Nitrosymbiomonas" Okubo et al. 2021
    • Species ?"Ca. Nitrosymbiomonas proteolyticus" Okubo et al. 2021
  • Class Chthonomonadetes Lee et al. 2011 ["Chthonomonadia" Oren, Parte & Garrity 2016]
    • Order Chthonomonadales Lee et al. 2011
      • Family Chthonomonadaceae Lee et al. 2011
  • Class Fimbriimonadia Im et al. 2012
    • Order Fimbriimonadales Im et al. 2012
  • Class Armatimonadia Tamaki et al. 2011
    • Order Armatimonadales Tamaki et al. 2011
      • Family Armatimonadaceae Tamaki et al. 2011
    • Order Capsulimonadales Li, Kudo & Tonouchi 2018
      • Family Capsulimonadaceae Li, Kudo & Tonouchi 2018
        • Genus Capsulimonas Li, Kudo & Tonouchi 2018
          • Species Capsulimonas corticalis Li, Kudo & Tonouchi 2018

Notes

    References
    1. Oren A, Garrity GM (2021). "Valid publication of the names of forty-two phyla of prokaryotes". Int J Syst Evol Microbiol. 71 (10): 5056. doi:10.1099/ijsem.0.005056. PMID 34694987.
    2. Tamaki, Hideyuki; Tanaka, Yasuhiro; Matsuzawa, Hiroaki; Muramatsu, Mizuho; Meng, Xian-Ying; Hanada, Satoshi; Mori, Kazuhiro; Kamagata, Yoichi (2010). "Armatimonas rosea gen. nov., sp. nov., a Gram-negative, aerobic, chemoheterotrophic bacterium of a novel bacterial phylum, Armatimonadetes phyl. nov., formally called the candidate phylum OP10". International Journal of Systematic and Evolutionary Microbiology. 61 (Pt 6): 1442–7. doi:10.1099/ijs.0.025643-0. PMID 20622056.
    3. Lee, Kevin C. Y.; Dunfield, Peter F.; Morgan, Xochitl C.; Crowe, Michelle A.; Houghton, Karen M.; Vyssotski, Mikhail; Ryan, Jason L. J.; Lagutin, Kirill; et al. (2010). "Chthonomonas calidirosea gen. nov., sp. nov., an aerobic, pigmented, thermophilic microorganism of a novel bacterial class, Chthonomonadetes classis. nov., of the newly described phylum Armatimonadetes originally designated candidate division OP10". International Journal of Systematic and Evolutionary Microbiology. 61 (Pt 10): 2482–90. doi:10.1099/ijs.0.027235-0. PMID 21097641.
    4. "The LTP". Retrieved 23 February 2021.
    5. "LTP_all tree in newick format". Retrieved 23 February 2021.
    6. "LTP_12_2021 Release Notes" (PDF). Retrieved 23 February 2021.
    7. "GTDB release 07-RS207". Genome Taxonomy Database. Retrieved 20 June 2022.
    8. "ar53_r207.sp_label". Genome Taxonomy Database. Retrieved 20 June 2022.
    9. "Taxon History". Genome Taxonomy Database. Retrieved 20 June 2022.
    10. J.P. Euzéby. "Armatimonadetes". List of Prokaryotic names with Standing in Nomenclature (LPSN). Archived from the original on 2011-06-13. Retrieved 2016-03-20.
    11. Sayers; et al. "Armatimonadetes". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2016-03-20.
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